OK! Today 3/26/2008:
1) Modified some tricky files so that a bar is placed into boards that have "stickied" topics. All topics above the bar are sticky topics, all topics below the bar are normal topics. It was confusing me too but this particular theme has no easy way to differentiate the two types of topics other than the tiny icon beside the post...and who looks at those anyway?
If there is no bar, then there are no sticky topics.
2) Changed the "NEW POST" button from blue to red. Hopefully this makes it quicker and easier to see what boards have new posts.
3) Changed the "new" button that appears beside topics that have new posts from blue to red, with the same intention.
Sadly, there is no way that I've found to bold topic subjects when they have new posts with this particular theme. Just know that topics with new posts will have the flashing red button beside it and will appear below the "sticky bar". This all probably sounds really confusing, but when you see what I'm talking about it should be super obvious.
If any of you have problems seeing red then let me know, the colors are easily changeable.